MetNet - plant pathway - photorespiration

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	interaction [1 shown]	Type	Location	Link
	RXN-961	Enzymatic reaction	cytosol
	AT5G38420	Translation	cytosol
	AT5G38420	Transcription	cytosol
	AT1G36370	Translation	cytosol
	AT1G36370	Transcription	cytosol
	AT4G32520	Translation	cytosol
	AT4G32520	Transcription	cytosol
	AT4G37930	Translation	cytosol
	AT4G37930	Transcription	cytosol
	AT5G47760	Transcription	cytosol
	AT2G35120	Transcription	cytosol
	AT1G68010	Translation	cytosol
	AT1G68010	Transcription	cytosol
	AT5G36700	Transcription	cytosol
	AT1G80380	Transcription	cytosol
	AT4G13930	Translation	cytosol
	AT4G13930	Transcription	cytosol
	AT2G13360	Translation	cytosol
	AT2G13360	Transcription	cytosol
	AT3G14420	Transcription	cytosol
	AT5G38410	Translation	cytosol
	AT5G38410	Transcription	cytosol
	AT5G36790	Translation	cytosol
	AT5G36790	Transcription	cytosol
	AT4G18360	Translation	cytosol
	AT4G18360	Transcription	cytosol
	AT1G70580	Translation	cytosol
	AT1G70580	Transcription	cytosol
	AT1G22020	Translation	cytosol
	AT1G22020	Transcription	cytosol
	AT1G23310	Translation	cytosol
	AT1G23310	Transcription	cytosol
	AT4G13890	Translation	cytosol
	AT4G13890	Transcription	cytosol
	AT3G14415	Transcription	cytosol
	AT5G06580	Translation	cytosol
	AT5G06580	Transcription	cytosol
	AT5G26780	Translation	cytosol
	AT5G26780	Transcription	cytosol
	AT5G38430	Translation	cytosol
	AT5G38430	Transcription	cytosol
	AT1G67090	Transcription	cytosol
	AT2G35370	Translation	cytosol
	AT2G35370	Transcription	cytosol
	Phosphoglycolate phosphatase	Enzymatic reaction	cytosol
	AT5G47760	Translation	cytosol
	AT1G67090	Translation	cytosol
	AT5G36700	Translation	cytosol
	RXN-969	Enzymatic reaction	cytosol
	glycine hydroxymethyltransferase-activity-Composition-OR	Composition-OR	cytosol
	Glycine hydroxymethyltransferase	Enzymatic reaction	cytosol
	glycine hydroxymethyltransferase-activity	Catalysis	cytosol
	GCVMULTI-RXN	Enzymatic reaction	cytosol
	GLYCINEDECARBOXYLASE-Composition-AND	Composition-AND	cytosol
	CPLX-822-Composition-AND	Composition-AND	cytosol
	AT2G35120	Translation	cytosol
	glycine decarboxylase-activity-Composition-OR	Composition-OR	cytosol
	glycine decarboxylase-activity	Catalysis	cytosol
	RUBISCO2-Composition-AND	Composition-AND	cytosol
	RUBISCO3-Composition-AND	Composition-AND	cytosol
	RUBISCO4-Composition-AND	Composition-AND	cytosol
	CPLX-805-Composition-AND	Composition-AND	cytosol
	SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN	Enzymatic reaction	cytosol
	Glycine aminotransferase	Enzymatic reaction	cytosol
	glycine transaminase-activity-Composition-OR	Composition-OR	cytosol
	glycine transaminase-activity	Catalysis	cytosol
	serine:glyoxylate aminotransferase	Catalysis	cytosol
	AT3G14420	Translation	cytosol
	glycerate kinase-activity-Composition-OR	Composition-OR	cytosol
	glycolate oxidase-activity-Composition-OR	Composition-OR	cytosol
	AT1G80380	Translation	cytosol
	ribulose bisphosphate carboxylase /oxygenase-activity-Composition-OR	Composition-OR	cytosol
	Glycerate dehydrogenase	Enzymatic reaction	cytosol
	Glycerate kinase	Enzymatic reaction	cytosol
	ENZRXN-1043-activity-Composition-OR	Composition-OR	cytosol
	AT3G14415	Translation	cytosol
	ENZRXN-1043-activity	Catalysis	cytosol
	glycolate oxidase-activity	Catalysis	cytosol
	glycerate kinase-activity	Catalysis	cytosol
	ribulose bisphosphate carboxylase /oxygenase-activity	Catalysis	cytosol
	hydroxypyruvate reductase	Catalysis	cytosol

Sources [36]: alpha-ketoglutarate AT1G22020 / serine hydroxymethyltransferase 6 AT1G23310 / glutamate:glyoxylate aminotransferase AT1G36370 / serine hydroxymethyltransferase 7 AT1G67090 / ribulose bisphosphate carboxylase small chain 1A AT1G68010 / hydroxypyruvate reductase AT1G70580 / alanine-2-oxoglutarate aminotransferase 2 AT1G80380 / P-loop containing nucleoside triphosphate hydrolas AT2G13360 / alanine:glyoxylate aminotransferase AT2G35120 / Single hybrid motif superfamily protein AT2G35370 / glycine decarboxylase complex H AT3G14415 / Aldolase-type TIM barrel family protein AT3G14420 / Aldolase-type TIM barrel family protein AT4G13890 / Pyridoxal phosphate (PLP)-dependent transferases s AT4G13930 / serine hydroxymethyltransferase 4 AT4G18360 / Aldolase-type TIM barrel family protein AT4G32520 / serine hydroxymethyltransferase 3 AT4G37930 / serine transhydroxymethyltransferase 1 AT5G06580 / FAD-linked oxidases family protein AT5G26780 / serine hydroxymethyltransferase 2 AT5G36700 / 2-phosphoglycolate phosphatase 1 AT5G36790 / Haloacid dehalogenase-like hydrolase (HAD) superfa AT5G38410 / Ribulose bisphosphate carboxylase (small chain) fa AT5G38420 / Ribulose bisphosphate carboxylase (small chain) fa AT5G38430 / Ribulose bisphosphate carboxylase (small chain) fa AT5G47760 / 2-phosphoglycolate phosphatase 2 ATP D-ribulose-1,5-bisphosphate glycerate H2O L-serine MONOMER-1241 MONOMER-818 NAD O2 serine hydroxymethyltransferase
Sinks [11]: 3-phosphoglycerate ADP CO2 H₂O₂ H⁺ hydroxypyruvate L-glutamate L-serine NADH NH3 phosphate

Type
metabolite [24]
	2-Phosphoglycolate, 3-phosphoglycerate, 5,10-methylene-THF, 5,6,7,8-tetrahydrofolate, ADP, alpha-ketoglutarate, ATP, CO2, D-ribulose-1,5-bisphosphate, glycerate, glycolate, glyoxylate, H2O, H₂O₂, H⁺, hydroxypyruvate, L-glutamate, L-glycine, L-serine, NAD, NADH, NH3, O2, phosphate,
RNA [25]
	AT1G22020 / serine hydroxymethyltransferase 6, AT1G23310 / glutamate:glyoxylate aminotransferase, AT1G36370 / serine hydroxymethyltransferase 7, AT1G67090 / ribulose bisphosphate carboxylase small chain 1A, AT1G68010 / hydroxypyruvate reductase, AT1G70580 / alanine-2-oxoglutarate aminotransferase 2, AT1G80380 / P-loop containing nucleoside triphosphate hydrolas, AT2G13360 / alanine:glyoxylate aminotransferase, AT2G35120 / Single hybrid motif superfamily protein, AT2G35370 / glycine decarboxylase complex H, AT3G14415 / Aldolase-type TIM barrel family protein, AT3G14420 / Aldolase-type TIM barrel family protein, AT4G13890 / Pyridoxal phosphate (PLP)-dependent transferases s, AT4G13930 / serine hydroxymethyltransferase 4, AT4G18360 / Aldolase-type TIM barrel family protein, AT4G32520 / serine hydroxymethyltransferase 3, AT4G37930 / serine transhydroxymethyltransferase 1, AT5G06580 / FAD-linked oxidases family protein, AT5G26780 / serine hydroxymethyltransferase 2, AT5G36700 / 2-phosphoglycolate phosphatase 1, AT5G36790 / Haloacid dehalogenase-like hydrolase (HAD) superfa, AT5G38410 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G38420 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G38430 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G47760 / 2-phosphoglycolate phosphatase 2,
polypeptide [30]
	AT1G22020 / serine hydroxymethyltransferase 6, AT1G23310 / glutamate:glyoxylate aminotransferase, AT1G36370 / serine hydroxymethyltransferase 7, AT1G67090 / ribulose bisphosphate carboxylase small chain 1A, AT1G68010 / hydroxypyruvate reductase, AT1G70580 / alanine-2-oxoglutarate aminotransferase 2, AT1G80380 / P-loop containing nucleoside triphosphate hydrolas, AT2G13360 / alanine:glyoxylate aminotransferase, AT2G35370 / glycine decarboxylase complex H, AT3G14415 / Aldolase-type TIM barrel family protein, AT3G14420 / Aldolase-type TIM barrel family protein, AT4G13890 / Pyridoxal phosphate (PLP)-dependent transferases s, AT4G13930 / serine hydroxymethyltransferase 4, AT4G18360 / Aldolase-type TIM barrel family protein, AT4G32520 / serine hydroxymethyltransferase 3, AT4G37930 / serine transhydroxymethyltransferase 1, AT5G06580 / FAD-linked oxidases family protein, AT5G26780 / serine hydroxymethyltransferase 2, AT5G36700 / 2-phosphoglycolate phosphatase 1, AT5G36790 / Haloacid dehalogenase-like hydrolase (HAD) superfa, AT5G38410 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G38420 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G38430 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G47760 / 2-phosphoglycolate phosphatase 2, MONOMER-1241, MONOMER-818, MONOMER-907, serine hydroxymethyltransferase, AT1G34630, ATCG00490 / ribulose-bisphosphate carboxylases,
gene [25]
	AT1G22020 / serine hydroxymethyltransferase 6, AT1G23310 / glutamate:glyoxylate aminotransferase, AT1G36370 / serine hydroxymethyltransferase 7, AT1G67090 / ribulose bisphosphate carboxylase small chain 1A, AT1G68010 / hydroxypyruvate reductase, AT1G70580 / alanine-2-oxoglutarate aminotransferase 2, AT1G80380 / P-loop containing nucleoside triphosphate hydrolas, AT2G13360 / alanine:glyoxylate aminotransferase, AT2G35120 / Single hybrid motif superfamily protein, AT2G35370 / glycine decarboxylase complex H, AT3G14415 / Aldolase-type TIM barrel family protein, AT3G14420 / Aldolase-type TIM barrel family protein, AT4G13890 / Pyridoxal phosphate (PLP)-dependent transferases s, AT4G13930 / serine hydroxymethyltransferase 4, AT4G18360 / Aldolase-type TIM barrel family protein, AT4G32520 / serine hydroxymethyltransferase 3, AT4G37930 / serine transhydroxymethyltransferase 1, AT5G06580 / FAD-linked oxidases family protein, AT5G26780 / serine hydroxymethyltransferase 2, AT5G36700 / 2-phosphoglycolate phosphatase 1, AT5G36790 / Haloacid dehalogenase-like hydrolase (HAD) superfa, AT5G38410 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G38420 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G38430 / Ribulose bisphosphate carboxylase (small chain) fa, AT5G47760 / 2-phosphoglycolate phosphatase 2,
protein complex [17]
	CPLX-805, CPLX-822, ENZRXN-1043-activity-31020, glycerate kinase-activity-27574, glycine decarboxylase-activity-34123, glycine hydroxymethyltransferase-activity-667, glycine transaminase-activity-16719, GLYCINEDECARBOXYLASE, glycolate oxidase-activity-13764, ribulose bisphosphate carboxylase /oxygenase-activity-11022, ribulose bisphosphate carboxylase/oxygenase, RUBISCO4, ribulose bisphosphate carboxylase /oxygenase-activity, phosphoglycolate phosphatase-activity, glycolate oxidase-activity-2, glycine hydroxymethyltransferase-activity-666, glycine decarboxylase-activity-34168,

Pathway details: photorespiration

Notes

interactions

Participating entities and compounds

		Pathway was created on Thu Jun 2, 2011.
		`Contributed by siva:` References:
		Parts of this pathway occur in: plastid cytosol nucleus mitochondrion peroxisome multiple locations

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